Aliases : rlmH, WX61_01178
Description : Ribosomal RNA large subunit methyltransferase H [Ensembl]. Predicted SPOUT methyltransferase [Interproscan].
Gene families : OG_02_0000766 (OrthoFinder) Phylogenetic Tree(s): OG0000766_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AKP15227 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL19592 | STM0641, ybeA | putative cytoplasmic protein [Ensembl]. Predicted SPOUT... | 0.03 | OrthoFinder | |
AGT25296 | N559_3654 | rRNA large subunit methyltransferase [Ensembl]. | 0.03 | OrthoFinder | |
KNA56390 | VCV51_032950 | hypothetical protein [Ensembl]. Predicted SPOUT... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006364 | rRNA processing | IEA | Interproscan |
MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | Enrichment |
MF | GO:0004518 | nuclease activity | IEP | Enrichment |
MF | GO:0004525 | ribonuclease III activity | IEP | Enrichment |
MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
BP | GO:0006098 | pentose-phosphate shunt | IEP | Enrichment |
BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
BP | GO:0006308 | DNA catabolic process | IEP | Enrichment |
BP | GO:0006740 | NADPH regeneration | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
MF | GO:0008882 | [glutamate-ammonia-ligase] adenylyltransferase activity | IEP | Enrichment |
CC | GO:0009318 | exodeoxyribonuclease VII complex | IEP | Enrichment |
BP | GO:0010033 | response to organic substance | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
BP | GO:0031554 | regulation of DNA-templated transcription, termination | IEP | Enrichment |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0042221 | response to chemical | IEP | Enrichment |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0043165 | Gram-negative-bacterium-type cell outer membrane assembly | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
MF | GO:0050661 | NADP binding | IEP | Enrichment |
BP | GO:0061024 | membrane organization | IEP | Enrichment |
BP | GO:0071709 | membrane assembly | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003742 | RlmH-like | 2 | 143 |
No external refs found! |