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  5. AKP15394

AKP15394 (dnaE, WX61_01347)


Aliases : dnaE, WX61_01347

Description : DNA polymerase III subunit alpha [Ensembl]. PHP domain, Helix-hairpin-helix motif, OB-fold nucleic acid binding domain, Bacterial DNA polymerase III alpha NTPase domain, Bacterial DNA polymerase III alpha subunit finger domain [Interproscan].


Gene families : OG_02_0000325 (OrthoFinder) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP15394
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC73295 dnaE, b0184 DNA polymerase III alpha subunit [Ensembl]. PHP domain,... 0.06 OrthoFinder
AAL19195 STM0231, dnaE DNA polymerase III, alpha subunit [Ensembl]. PHP domain,... 0.04 OrthoFinder
AGT25840 N559_4216 DNA polymerase III subunit alpha [Ensembl]. Bacterial... 0.03 OrthoFinder
CRO13404 dnaE DNA polymerase III subunit alpha [Ensembl]. PHP domain,... 0.04 OrthoFinder
EDJ91313 CGSHi22421_04398 DNA polymerase III subunit alpha [Ensembl]. PHP domain,... 0.03 OrthoFinder
KNA51808 VCV51_031511 DNA polymerase III [Ensembl]. PHP domain,... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 979 1056
IPR004013 PHP_dom 9 174
IPR040982 DNA_pol3_finger 566 728
IPR011708 DNA_pol3_alpha_NTPase_dom 296 563
IPR029460 DNAPol_HHH 801 890
No external refs found!