AKP15926 (clpB, WX61_01896)

Aliases : clpB, WX61_01896

Description : Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), ATPase family associated with various cellular activities (AAA) [Interproscan].

Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKP15926
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC75641 clpB, b2592 protein disaggregation chaperone [Ensembl]. C-terminal,... 0.06 OrthoFinder
AAK99111 spr0307, clpL ATP-dependent protease ATP-binding subunit [Ensembl].... 0.02 OrthoFinder
AAK99529 spr0725, clpE ATP dependent protease [Ensembl]. C-terminal, AAA lid... 0.03 OrthoFinder
AAL19881 STM0945, clpA ATP-binding subunit of serine protease [Ensembl].... 0.02 OrthoFinder
AAL21550 STM2660, clpB ATP-dependent protease [Ensembl]. C-terminal, AAA lid... 0.05 OrthoFinder
ADK87250 clpB, MPNE_0627 chaperone protein ClpB [Ensembl]. AAA lid domain, ATPase... 0.03 OrthoFinder
AEA94480 clpB, OG1RF_11793 chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.03 OrthoFinder
AGT23103 N559_1341 protein disaggregation chaperone [Ensembl]. D2-small... 0.06 OrthoFinder
AGT25018 N559_3365 ATP-dependent Clp protease ATP-binding subunit... 0.02 OrthoFinder
CBI66855 clpB, HPB8_1298 ATP-dependent Clp protease ATP-binding subunit ClpB... 0.03 OrthoFinder
CPC57876 clpC, ERS093114_00855 endopeptidase Clp ATP-binding subunit C [Ensembl].... 0.03 OrthoFinder
CRN66395 clpB_1 Heat shock protein F84.1 [Ensembl]. C-terminal, AAA lid... 0.04 OrthoFinder
CRO87324 clpC_2 Negative regulator of genetic competence ClpC/MecB... 0.04 OrthoFinder
EDJ91635 CGSHi22421_07768 hypothetical protein [Ensembl]. C-terminal, AAA lid... 0.08 OrthoFinder
KNA57481 VCV51_030464, ClpB ATP-dependent chaperone ClpB [Ensembl]. C-terminal, AAA... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 601 763
IPR041546 ClpA/ClpB_AAA_lid 342 442
IPR003959 ATPase_AAA_core 203 336
IPR004176 Clp_R_dom 17 68
IPR004176 Clp_R_dom 96 145
IPR019489 Clp_ATPase_C 769 849
No external refs found!