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  5. AKP16180

AKP16180 (uup_2, WX61_02156)


Aliases : uup_2, WX61_02156

Description : ABC transporter ATP-binding protein uup [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP16180
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC73907 ybiT, b0820 ABC-F family putative regulatory ATPase [Ensembl]. ABC... 0.09 OrthoFinder
AAC74035 uup, b0949 replication regulatory ABC-F family DNA-binding ATPase... 0.05 OrthoFinder
AAC77344 ettA, b4391 energy-dependent translational throttle A [Ensembl]. ABC... 0.05 OrthoFinder
AAK99482 spr0678, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.04 OrthoFinder
AAL19774 STM0838, ybiT putative ATPase component of ABC transporter with... 0.08 OrthoFinder
AAL19995 STM1062, uup putative ATPase component of ABC transporter [Ensembl].... 0.08 OrthoFinder
AAL23396 STM4581, yjjK putative transport protein [Ensembl]. ABC transporter... 0.04 OrthoFinder
AGT22228 N559_0416 putative ABC transporter ATP-binding protein [Ensembl].... 0.04 OrthoFinder
AGT24961 N559_3303 ABC transporter ATPase component [Ensembl]. ABC... 0.03 OrthoFinder
AGT25131 N559_3480 putative transport system ATP-binding component... 0.03 OrthoFinder
AGT26049 N559_4444 putative ABC transporter ATP-binding protein [Ensembl].... 0.02 OrthoFinder
AHY40102 CJ8421_04395 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AKI49428 L2625_01529 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
AKI49870 uup, L2625_02017 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
CCG26162 No alias COG0488: ATPase components of ABC transporters with... 0.04 OrthoFinder
CCG26385 No alias ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.03 OrthoFinder
CCL18408 BN171_2290013 ABC-type transport system, ATP-binding protein... 0.03 OrthoFinder
CPC31994 yheS_1, ERS093114_00026 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.07 OrthoFinder
CPD07676 yheS_2, ERS093114_02000 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CRN86127 yheS_1 putative ABC transporter ATP-binding protein YheS... 0.03 OrthoFinder
CRO90899 uup ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.05 OrthoFinder
CRP46393 yheS_2 putative ABC transporter ATP-binding protein YheS... 0.06 OrthoFinder
EDJ91009 CGSHi22421_02766 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.06 OrthoFinder
KNA55290 VCV51_033103 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder
KNA57470 VCV51_030455 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 18 184
IPR003439 ABC_transporter-like_ATP-bd 339 478
IPR032781 ABC_tran_Xtn 224 311
No external refs found!