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  5. CCL18433

CCL18433 (glnF, BN171_2320010)


Aliases : glnF, BN171_2320010

Description : RNA polymerase sigma-54 factor [Ensembl]. Sigma-54, Sigma-54 factor [Interproscan].


Gene families : OG_02_0000919 (OrthoFinder) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL18433
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
KNA55035 VCV51_031706 RNA polymerase sigma-54 factor [Ensembl]. Sigma-54... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0001216 DNA-binding transcription activator activity IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR007046 RNA_pol_sigma_54_core-bd 87 274
IPR007634 RNA_pol_sigma_54_DNA-bd 289 446
IPR000394 RNA_pol_sigma_54 6 51
UniProtKB U3WW34