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  5. CCL18448

CCL18448 (BN171_2340008)


Aliases : BN171_2340008

Description : Transcriptional regulator, sigma-54-dependent [Ensembl]. Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL18448
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AAC73433 prpR, b0330 propionate catabolism operon regulatory protein... 0.04 OrthoFinder
AAC75280 atoC, b2220 fused response regulator of ato operon, in two-component... 0.02 OrthoFinder
AAC75607 glrR, b2554 response regulator regulating glmY sRNA in two-component... 0.04 OrthoFinder
AAL19321 STM0367, prpR regulator for prp operon (EBP family) [Ensembl].... 0.02 OrthoFinder
AGT22959 N559_1193 anaerobic nitric oxide reductase transcription regulator... 0.03 OrthoFinder
AKI50171 L2625_02335 sigma-54 dependent transcriptional regulator [Ensembl].... 0.05 OrthoFinder
AKP15094 glnG, WX61_01036 Nitrogen regulation protein NR(I) [Ensembl]. Sigma-54... 0.02 OrthoFinder
CRN65608 qseF Quorum-sensing regulator protein F [Ensembl]. Sigma-54... 0.02 OrthoFinder
CRO45240 ntrC_1 Nitrogen assimilation regulatory protein [Ensembl].... 0.04 OrthoFinder
CRO45386 zraR_4 Transcriptional regulatory protein ZraR [Ensembl].... 0.03 OrthoFinder
CRO96924 No alias (S)-limonene 6-monooxygenase [Ensembl]. PAS fold,... 0.03 OrthoFinder
CRP14713 prpR_1 Propionate catabolism operon regulatory protein... 0.03 OrthoFinder
CRP79684 zraR_6 Transcriptional regulatory protein ZraR [Ensembl].... 0.03 OrthoFinder
KNA55086 VCV51_031847 nitrogen regulation protein NR(I) [Ensembl]. Sigma-54... 0.07 OrthoFinder
KNA58588 VCV51_031119 psp operon transcriptional activator [Ensembl]. Sigma-54... 0.04 OrthoFinder
KNA59396 VCV51_031296 sigma-54 interaction domain-containing protein... 0.03 OrthoFinder
KNA60650 VCV51_032089 sigma-54 interaction domain-containing protein... 0.05 OrthoFinder
KNA60791 VCV51_032053 sigma-54 interaction domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR002078 Sigma_54_int 27 194
IPR002197 HTH_Fis 303 344
UniProtKB U3WW51