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Aliases : uppS, BN171_2410003
Description : Undecaprenyl pyrophosphate synthetase [Ensembl]. Putative undecaprenyl diphosphate synthase [Interproscan].
Gene families : OG_02_0000379 (OrthoFinder) Phylogenetic Tree(s): OG0000379_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCL18521 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73285 | uppS, b0174 | undecaprenyl pyrophosphate synthase [Ensembl]. Putative... | 0.07 | OrthoFinder | |
| AAL19185 | STM0221, uppS | undecaprenyl pyrophosphate synthetase (di-trans,... | 0.06 | OrthoFinder | |
| AGT25849 | N559_4227 | undecaprenyl pyrophosphate synthase [Ensembl]. | 0.04 | OrthoFinder | |
| AHY40047 | CJ8421_04100 | undecaprenyl diphosphate synthase [Ensembl]. Putative... | 0.03 | OrthoFinder | |
| AKI49311 | uppS, L2625_01405 | undecaprenyl diphosphate synthase [Ensembl]. Decaprenyl... | 0.05 | OrthoFinder | |
| AKP15168 | ispU, WX61_01114 | Ditrans,polycis-undecaprenyl-diphosphate synthase... | 0.02 | OrthoFinder | |
| CBI65821 | uppS, HPB8_264 | undecaprenyl pyrophosphate synthetase [Ensembl].... | 0.03 | OrthoFinder | |
| CPC35219 | uppS, ERS093114_00164 | Di-trans%2Cpoly-cis-decaprenylcistransferase [Ensembl].... | 0.06 | OrthoFinder | |
| CRO13815 | ispU | Ditrans,polycis-undecaprenyl-diphosphate synthase... | 0.05 | OrthoFinder | |
| KNA51797 | VCV51_033541 | di-trans,poly-cis-decaprenylcistransferase [Ensembl].... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| MF | GO:0008452 | RNA ligase activity | IEP | Enrichment |
| MF | GO:0008855 | exodeoxyribonuclease VII activity | IEP | Enrichment |
| MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Enrichment |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
| MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001441 | UPP_synth-like | 21 | 241 |
| UniProtKB | U3WWS3 |