AAL19088 (STM0124, murF)

Aliases : STM0124, murF

Description : D-alanine:D-alanine-adding enzyme [Ensembl]. Mur ligase family, Mur ligase middle domain [Interproscan].

Gene families : OG_02_0000378 (OrthoFinder) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL19088
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AAC73197	murF, b0086	UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine...	0.21	OrthoFinder
AAL00318	spr1514, murF	UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-...	0.03	OrthoFinder
AEA93262	ppx, OG1RF_10575	exopolyphosphatase [Ensembl]. Mur ligase family, Mur...	0.03	OrthoFinder
AGT25953	N559_4340	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine...	0.11	OrthoFinder
AHY40010	CJ8421_03905	Mur ligase family protein [Ensembl]. Mur ligase middle...	0.03	OrthoFinder
AKI48804	murF, L2625_00877	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine...	0.05	OrthoFinder
AKP14610	murF, WX61_00529	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine...	0.04	OrthoFinder
CCG27254	No alias	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate...	0.06	OrthoFinder
CCL19117	murF, BN171_2870047	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine...	0.03	OrthoFinder
CCP44933	murF, Rv2157c	Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2,...	0.04	OrthoFinder
CRP08587	murF	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine...	0.07	OrthoFinder
EDJ91938	murE, CGSHi22421_09283	UDP-N-acetylmuramoylalanyl-D-glutamate--2,...	0.07	OrthoFinder
KNA53283	VCV51_031618	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine...	0.08	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	Interproscan
MF	GO:0016874	ligase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004749	ribose phosphate diphosphokinase activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Enrichment
MF	GO:0004820	glycine-tRNA ligase activity	IEP	Enrichment
MF	GO:0004832	valine-tRNA ligase activity	IEP	Enrichment
BP	GO:0006082	organic acid metabolic process	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006323	DNA packaging	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006426	glycyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006520	cellular amino acid metabolic process	IEP	Enrichment
BP	GO:0007059	chromosome segregation	IEP	Enrichment
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	Enrichment
MF	GO:0009007	site-specific DNA-methyltransferase (adenine-specific) activity	IEP	Enrichment
MF	GO:0009008	DNA-methyltransferase activity	IEP	Enrichment
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Enrichment
CC	GO:0009295	nucleoid	IEP	Enrichment
CC	GO:0009360	DNA polymerase III complex	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016778	diphosphotransferase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
BP	GO:0019752	carboxylic acid metabolic process	IEP	Enrichment
BP	GO:0030258	lipid modification	IEP	Enrichment
BP	GO:0030259	lipid glycosylation	IEP	Enrichment
BP	GO:0030261	chromosome condensation	IEP	Enrichment
BP	GO:0032775	DNA methylation on adenine	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
CC	GO:0042575	DNA polymerase complex	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0043436	oxoacid metabolic process	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Enrichment
MF	GO:0051287	NAD binding	IEP	Enrichment
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment
BP	GO:0070206	protein trimerization	IEP	Enrichment
MF	GO:0070403	NAD+ binding	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004101	Mur_ligase_C	313	392
IPR000713	Mur_ligase_N	27	91
IPR013221	Mur_ligase_cen	106	292

External Links

No external refs found!

AAL19088 (STM0124, murF)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation