CCL18724 (BN171_2590012)


Aliases : BN171_2590012

Description : Transcription antiterminator, PTS operon regulator [Ensembl]. PTS system fructose IIA component, Phosphoenolpyruvate-dependent sugar phosphotransferase system, PRD domain, Sigma-54 interaction domain [Interproscan].


Gene families : OG_02_0000294 (OrthoFinder) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL18724
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AGT25417 N559_3781 putative inner membrane protein [Ensembl]. PRD domain,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0042908 xenobiotic transport IEP Enrichment
BP GO:0042919 benzoate transport IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR002178 PTS_EIIA_type-2_dom 841 973
IPR011608 PRD 505 582
IPR002078 Sigma_54_int 131 296
IPR004701 PTS_EIIA_man-typ 597 685
UniProtKB U3X0L7