AHY39623 (CJ8421_01840)


Aliases : CJ8421_01840

Description : RND efflux system, membrane fusion protein CmeA [Ensembl]. Barrel-sandwich domain of CusB or HlyD membrane-fusion [Interproscan].


Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY39623
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC73565 acrA, b0463 multidrug efflux system [Ensembl]. HlyD membrane-fusion... 0.03 OrthoFinder
AAL21030 STM2126 putative HlyD family secretion protein [Ensembl].... 0.03 OrthoFinder
AGT25400 N559_3764, HlyD putative secretion protein HlyD [Ensembl].... 0.04 OrthoFinder
AKP14429 mexA, WX61_00347 Multidrug resistance protein MexA precursor [Ensembl].... 0.04 OrthoFinder
CBI66362 HPB8_805 conserved hypothetical protein [Ensembl]. Biotin-lipoyl... 0.04 OrthoFinder
CRN65192 acrA Acriflavine resistance protein A precursor [Ensembl].... 0.04 OrthoFinder
CRO09488 bepF_1 Efflux pump periplasmic linker BepF [Ensembl].... 0.05 OrthoFinder
CRO58950 bepF_2 Efflux pump periplasmic linker BepF [Ensembl].... 0.02 OrthoFinder
CRO88312 mexA_1 Multidrug resistance protein MexA precursor [Ensembl].... 0.06 OrthoFinder
CRP32469 mdtA_3 Multidrug transporter MdtA [Ensembl]. Biotin-lipoyl... 0.03 OrthoFinder
CRP58366 mdtA_4 Multidrug transporter MdtA [Ensembl]. Barrel-sandwich... 0.03 OrthoFinder
CRP65706 bepF_3 Efflux pump periplasmic linker BepF [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR032317 HlyD_D23 63 283
No external refs found!