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  5. AAL19994

AAL19994 (STM1061, ycbY)


Aliases : STM1061, ycbY

Description : putative N6-adenine-specific DNA methylase [Ensembl]. THUMP domain, Putative RNA methylase family UPF0020, S-adenosylmethionine-dependent methyltransferase [Interproscan].


Gene families : OG_02_0000755 (OrthoFinder) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19994
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAC74034 rlmL, b0948 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases,... 0.16 OrthoFinder
AEA93616 OG1RF_10929 site-specific DNA-methyltransferase [Ensembl]. THUMP... 0.03 OrthoFinder
AGT24962 N559_3304 23S rRNA m(2)G2445 methyltransferase [Ensembl]. THUMP... 0.11 OrthoFinder
AKI49881 L2625_02030 RNA methylase domain protein [Ensembl]. Putative RNA... 0.04 OrthoFinder
AKP14571 rlmL, WX61_00490 Ribosomal RNA large subunit methyltransferase L... 0.05 OrthoFinder
CPC75686 rlmL, ERS093114_01210 N6-adenine-specific DNA methylase [Ensembl]. THUMP... 0.03 OrthoFinder
CRO64256 rlmL Ribosomal RNA large subunit methyltransferase K/L... 0.08 OrthoFinder
KNA55288 VCV51_033101 THUMP domain-containing protein [Ensembl]. THUMP domain,... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004114 THUMP_dom 20 153
IPR000241 RNA_methylase_dom 162 375
IPR019614 SAM-dep_methyl-trfase 476 658
No external refs found!