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CPC69731 (gyrB, ERS093114_01087)


Aliases : gyrB, ERS093114_01087

Description : DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine kinase-, DNA gyrase B subunit [Interproscan].


Gene families : OG_02_0000123 (OrthoFinder) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC69731
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC76066 parE, b3030 DNA topoisomerase IV, subunit B [Ensembl]. Toprim... 0.03 OrthoFinder
AAL22055 STM3181, parE DNA topoisomerase IV, subunit B [Ensembl]. Toprim... 0.03 OrthoFinder
AAL22694 STM3835, gyrB DNA gyrase, subunit B [Ensembl]. Toprim domain,... 0.05 OrthoFinder
AAT48201 gyrB, b3699 DNA gyrase, subunit B [Ensembl]. Toprim domain,... 0.07 OrthoFinder
AGT22529 N559_0736 DNA topoisomerase IV subunit B [Ensembl]. Toprim domain,... 0.04 OrthoFinder
AKI47982 gyrB, L2625_00006 DNA gyrase, B subunit [Ensembl]. DNA topoisomerase,... 0.04 OrthoFinder
CRP69988 gyrB DNA gyrase subunit B [Ensembl]. Toprim domain, Histidine... 0.04 OrthoFinder
KNA50940 VCV51_033648 DNA topoisomerase IV [Ensembl]. Toprim domain, Histidine... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004140 dephospho-CoA kinase activity IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
BP GO:0015937 coenzyme A biosynthetic process IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR002288 DNA_gyrase_B_C 574 634
IPR013506 Topo_IIA_bsu_dom2 232 401
IPR006171 TOPRIM_domain 430 541
IPR003594 HATPase_C 40 180
No external refs found!