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  5. CPD03295

CPD03295 (pcrA, ERS093114_01873)


Aliases : pcrA, ERS093114_01873

Description : ATP-dependent DNA helicase UvrD/PcrA [Ensembl]. UvrD/REP helicase N-terminal domain, UvrD-like helicase C-terminal domain [Interproscan].


Gene families : OG_02_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD03295
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAK99844 spr1040, rexA First subunit of major exonuclease [Ensembl]. PD-(D/E)XK... 0.05 OrthoFinder
AEA93145 pcrA, OG1RF_10458 ATP-dependent DNA helicase PcrA [Ensembl]. UvrD/REP... 0.04 OrthoFinder
AGT26590 N559_5009 ATP-dependent DNA helicase Rep [Ensembl]. UvrD-like... 0.05 OrthoFinder
AKI50264 addA, L2625_02432 ATP-dependent nuclease, subunit A [Ensembl]. UvrD/AddA... 0.03 OrthoFinder
AKP16203 rep, WX61_02179 ATP-dependent DNA helicase Rep [Ensembl]. UvrD/REP... 0.03 OrthoFinder
CCG26405 No alias ATP-dependent DNA helicase UvrD/PcrA [Ensembl]. UvrD/REP... 0.04 OrthoFinder
CCG26596 No alias ATP-dependent nuclease, subunit A [Ensembl]. PD-(D/E)XK... 0.04 OrthoFinder
CCL17180 BN171_1360002 Putative helicase, superfamily 1, UvrD-family [Ensembl].... 0.03 OrthoFinder
CRO28795 rep ATP-dependent DNA helicase rep [Ensembl]. UvrD/REP... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR014017 DNA_helicase_UvrD-like_C 276 613
No external refs found!