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  5. CCL19428

CCL19428 (nrdE, BN171_3130003)


Aliases : nrdE, BN171_3130003

Description : Ribonucleoside-diphosphate reductase subunit alpha (Ribonucleotide reductase large subunit) [Ensembl]. Ribonucleotide reductase N-terminal, Ribonucleotide reductase [Interproscan].


Gene families : OG_02_0000241 (OrthoFinder) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19428
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AAK99869 spr1065, nrdE Ribonucleoside-diphosphate reductase (major subunit)... 0.03 OrthoFinder
AAL21692 STM2807, nrdE ribonucleoside diphosphate reductase 2, alpha subunit... 0.03 OrthoFinder
AGT23359 N559_1612 ribonucleotide-diphosphate reductase subunit alpha... 0.02 OrthoFinder
CCG27746 No alias Ribonucleotide reductase of class Ib (aerobic),alpha... 0.03 OrthoFinder
CRP63243 nrdA Ribonucleoside-diphosphate reductase 1 subunit alpha... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000788 RNR_lg_C 163 682
IPR013509 RNR_lsu_N 87 158
IPR013554 RNR_N 3 84
UniProtKB U3WYZ2