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CCG26385


Description : ABC transporter ATP-binding protein uup [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26385
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73907 ybiT, b0820 ABC-F family putative regulatory ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AAC74035 uup, b0949 replication regulatory ABC-F family DNA-binding ATPase... 0.04 OrthoFinder
AAC77344 ettA, b4391 energy-dependent translational throttle A [Ensembl]. ABC... 0.05 OrthoFinder
AAK99482 spr0678, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.04 OrthoFinder
AAK99825 spr1021, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.05 OrthoFinder
AAL19774 STM0838, ybiT putative ATPase component of ABC transporter with... 0.09 OrthoFinder
AAL19995 STM1062, uup putative ATPase component of ABC transporter [Ensembl].... 0.04 OrthoFinder
AAL23396 STM4581, yjjK putative transport protein [Ensembl]. ABC transporter... 0.04 OrthoFinder
AEA94698 OG1RF_12011 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AGT22228 N559_0416 putative ABC transporter ATP-binding protein [Ensembl].... 0.05 OrthoFinder
AGT24961 N559_3303 ABC transporter ATPase component [Ensembl]. ABC... 0.05 OrthoFinder
AGT25131 N559_3480 putative transport system ATP-binding component... 0.05 OrthoFinder
AKI49428 L2625_01529 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.06 OrthoFinder
AKI50068 L2625_02223 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder
AKP14644 yjjK, WX61_00565 putative ABC transporter ATP-binding protein YjjK... 0.03 OrthoFinder
AKP16088 uup_1, WX61_02062 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
AKP16180 uup_2, WX61_02156 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.03 OrthoFinder
CCL16955 BN171_1030005 ABC-type transport system, ATP-binding protein... 0.04 OrthoFinder
CCL18408 BN171_2290013 ABC-type transport system, ATP-binding protein... 0.06 OrthoFinder
CPC31994 yheS_1, ERS093114_00026 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder
CRN86127 yheS_1 putative ABC transporter ATP-binding protein YheS... 0.03 OrthoFinder
CRO90899 uup ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
EDJ91009 CGSHi22421_02766 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
KNA55290 VCV51_033103 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 80 211
No external refs found!