CCG27252


Description : Peptide chain release factor 3 [Ensembl]. Class II release factor RF3, Elongation factor Tu domain 2, Elongation factor Tu GTP binding domain [Interproscan].


Gene families : OG_02_0000871 (OrthoFinder) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27252
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC77328 prfC, b4375 peptide chain release factor RF-3 [Ensembl]. Class II... 0.04 OrthoFinder
AAL23375 STM4560, prfC peptide chain release factor RF-3 [Ensembl]. Class II... 0.03 OrthoFinder
AEA93126 prfC, OG1RF_10439 peptide chain release factor RF3 [Ensembl]. Class II... 0.06 OrthoFinder
AGT26063 N559_4458 peptide chain release factor 3 [Ensembl]. Elongation... 0.04 OrthoFinder
AKI48936 prfC, L2625_01017 peptide chain release factor 3 [Ensembl]. Translation... 0.06 OrthoFinder
AKP15581 prfC, WX61_01541 Peptide chain release factor 3 [Ensembl]. Class II... 0.03 OrthoFinder
CPC42705 prfC, ERS093114_00407 Peptide chain release factor 3 [Ensembl]. Class II... 0.03 OrthoFinder
CRP15516 prfC Peptide chain release factor 3 [Ensembl]. Class II... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 9 265
IPR004161 EFTu-like_2 303 369
IPR032090 RF3_C 377 501
No external refs found!