CCG27252

Description : Peptide chain release factor 3 [Ensembl]. Class II release factor RF3, Elongation factor Tu domain 2, Elongation factor Tu GTP binding domain [Interproscan].

Gene families : OG_02_0000871 (OrthoFinder) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCG27252
Cluster	HCAA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AAC77328	prfC, b4375	peptide chain release factor RF-3 [Ensembl]. Class II...	0.04	OrthoFinder
AAL23375	STM4560, prfC	peptide chain release factor RF-3 [Ensembl]. Class II...	0.03	OrthoFinder
AEA93126	prfC, OG1RF_10439	peptide chain release factor RF3 [Ensembl]. Class II...	0.06	OrthoFinder
AGT26063	N559_4458	peptide chain release factor 3 [Ensembl]. Elongation...	0.04	OrthoFinder
AKI48936	prfC, L2625_01017	peptide chain release factor 3 [Ensembl]. Translation...	0.06	OrthoFinder
AKP15581	prfC, WX61_01541	Peptide chain release factor 3 [Ensembl]. Class II...	0.03	OrthoFinder
CPC42705	prfC, ERS093114_00407	Peptide chain release factor 3 [Ensembl]. Class II...	0.03	OrthoFinder
CRP15516	prfC	Peptide chain release factor 3 [Ensembl]. Class II...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
MF	GO:0016874	ligase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	9	265
IPR004161	EFTu-like_2	303	369
IPR032090	RF3_C	377	501

External Links

No external refs found!

CCG27252

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation