CCL19762 (BN171_3460006)


Aliases : BN171_3460006

Description : Transcription antiterminator, PTS operon regulator [Ensembl]. PTS system fructose IIA component, PRD domain, Sigma-54 interaction domain [Interproscan].


Gene families : OG_02_0000294 (OrthoFinder) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19762
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AAL19522 STM0571 putative inner membrane protein [Ensembl]. PRD domain,... 0.02 OrthoFinder
AAL22631 STM3773 putative NtrC family transcriptional regulator... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
InterPro domains Description Start Stop
IPR011608 PRD 830 913
IPR004701 PTS_EIIA_man-typ 566 633
IPR002078 Sigma_54_int 106 270
UniProtKB U3X0B3