Description : LSU ribosomal protein L16p (L10e) [Ensembl]. Ribosomal protein L16p/L10e [Interproscan].
Gene families : OG_02_0000399 (OrthoFinder) Phylogenetic Tree(s): OG0000399_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CCG27386 | |
Cluster | HCAA: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76338 | rplP, b3313 | 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal... | 0.2 | OrthoFinder | |
AAK99000 | spr0196, rplP | 50S Ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.17 | OrthoFinder | |
AAL22296 | STM3433, rplP | 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal... | 0.21 | OrthoFinder | |
ADK87106 | rplP, MPNE_0201 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.12 | OrthoFinder | |
AEA92845 | rplP, OG1RF_10158 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.17 | OrthoFinder | |
AGT22249 | N559_0441 | 50S ribosomal protein L16 [Ensembl]. | 0.06 | OrthoFinder | |
AHY40885 | rplP, CJ8421_08565 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.14 | OrthoFinder | |
AKI50560 | rplP, L2625_02770 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.2 | OrthoFinder | |
AKP15130 | rplP, WX61_01076 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.07 | OrthoFinder | |
CBI65724 | rplP, HPB8_167 | large subunit ribosomal protein L16 [Ensembl]. Ribosomal... | 0.17 | OrthoFinder | |
CCL20570 | rplP, BN171_70010 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.19 | OrthoFinder | |
CCP43452 | rplP, Rv0708 | 50S ribosomal protein L16 RplP [Ensembl]. Ribosomal... | 0.13 | OrthoFinder | |
CPD13746 | rplP, ERS093114_02129 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.2 | OrthoFinder | |
CRO73962 | rplP | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.16 | OrthoFinder | |
EDJ91361 | rpsC, CGSHi22421_04638 | 30S ribosomal protein S3 [Ensembl]. Ribosomal protein... | 0.18 | OrthoFinder | |
KNA54979 | VCV51_033162 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.16 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0015833 | peptide transport | IEP | Enrichment |
CC | GO:0016020 | membrane | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
BP | GO:0042886 | amide transport | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016180 | Ribosomal_L10e/L16 | 4 | 132 |
No external refs found! |