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  5. CCG27404

CCG27404


Description : SSU ribosomal protein S11p (S14e) [Ensembl]. Ribosomal protein S11 [Interproscan].


Gene families : OG_02_0000561 (OrthoFinder) Phylogenetic Tree(s): OG0000561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27404
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76322 rpsK, b3297 30S ribosomal subunit protein S11 [Ensembl]. Ribosomal... 0.19 OrthoFinder
AAK99018 spr0214, rpsK 30S Ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
AAL22280 STM3417, rpsK 30S ribosomal subunit protein S11 [Ensembl]. Ribosomal... 0.22 OrthoFinder
ADK86660 rpsK, MPNE_0219 30S ribosomal protein S11 [Ensembl]. 0.11 OrthoFinder
AEA92863 rpsK, OG1RF_10176 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
AHY40766 CJ8421_07970 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AKI50542 rpsK, L2625_02752 ribosomal protein S11 [Ensembl]. Ribosomal protein S11... 0.13 OrthoFinder
CBI65741 rpsK, HPB8_184 small subunit ribosomal protein S11 [Ensembl]. Ribosomal... 0.11 OrthoFinder
CCL20589 rpsK, BN171_70029 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
CCP46281 rpsK, Rv3459c 30S ribosomal protein S11 RpsK [Ensembl]. Ribosomal... 0.11 OrthoFinder
CPD14353 rpsK, ERS093114_02147 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
CRO74429 rpsK 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
EDJ91379 CGSHi22421_04728 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
KNA54995 VCV51_033178 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 2 96
No external refs found!