Description : tRNA pseudouridine synthase A [Ensembl]. tRNA pseudouridine synthase [Interproscan].
Gene families : OG_02_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CCG27549 | |
Cluster | HCAA: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL21269 | STM2368, truA | pseudouridylate synthase I [Ensembl]. tRNA pseudouridine... | 0.03 | OrthoFinder | |
AHY40050 | truA, CJ8421_04115 | tRNA pseudouridine synthase A [Ensembl]. tRNA... | 0.03 | OrthoFinder | |
CRO43416 | truA | tRNA pseudouridine synthase A [Ensembl]. tRNA... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
MF | GO:0003848 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | IEP | Enrichment |
MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
MF | GO:0003919 | FMN adenylyltransferase activity | IEP | Enrichment |
MF | GO:0004127 | cytidylate kinase activity | IEP | Enrichment |
BP | GO:0006260 | DNA replication | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
BP | GO:0006766 | vitamin metabolic process | IEP | Enrichment |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Enrichment |
BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
MF | GO:0008961 | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity | IEP | Enrichment |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Enrichment |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
MF | GO:0016301 | kinase activity | IEP | Enrichment |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Enrichment |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
BP | GO:0019346 | transsulfuration | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Enrichment |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Enrichment |
BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
No external refs found! |