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  5. CCG27549

CCG27549


Description : tRNA pseudouridine synthase A [Ensembl]. tRNA pseudouridine synthase [Interproscan].


Gene families : OG_02_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27549
Cluster HCAA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAL21269 STM2368, truA pseudouridylate synthase I [Ensembl]. tRNA pseudouridine... 0.03 OrthoFinder
AHY40050 truA, CJ8421_04115 tRNA pseudouridine synthase A [Ensembl]. tRNA... 0.03 OrthoFinder
CRO43416 truA tRNA pseudouridine synthase A [Ensembl]. tRNA... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0008961 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 144 247
IPR020097 PsdUridine_synth_TruA_a/b_dom 6 104
No external refs found!