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  5. CCP43428

CCP43428 (tuf, Rv0685)


Aliases : tuf, Rv0685

Description : Probable iron-regulated elongation factor TU Tuf (EF-TU) [Ensembl]. Elongation factor Tu domain 2, Elongation factor Tu C-terminal domain, Elongation factor Tu GTP binding domain [Interproscan].


Gene families : OG_02_0000191 (OrthoFinder) Phylogenetic Tree(s): OG0000191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCP43428
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76954 tufB, b3980 translation elongation factor EF-Tu 2 [Ensembl].... 0.17 OrthoFinder
AAL00147 spr1343, tufA Translation elongation factor TU [Ensembl]. Elongation... 0.02 OrthoFinder
AAL22974 STM4146, tufB protein chain elongation factor EF-Tu [Ensembl].... 0.22 OrthoFinder
ADK86917 tuf, MPNE_0775 translation elongation factor Tu [Ensembl]. Elongation... 0.03 OrthoFinder
AEA92834 tuf, OG1RF_10147 elongation factor EF1A [Ensembl]. Elongation factor Tu... 0.09 OrthoFinder
AGT26524 N559_4940 elongation factor Tu [Ensembl]. Elongation factor Tu GTP... 0.04 OrthoFinder
AHY39723 CJ8421_02350 elongation factor Tu [Ensembl]. Elongation factor Tu... 0.18 OrthoFinder
AKI50588 tufA, L2625_02798 translation elongation factor Tu [Ensembl]. Translation... 0.11 OrthoFinder
AKP15104 tufA_1, WX61_01049 Elongation factor Tu [Ensembl]. Elongation factor Tu... 0.04 OrthoFinder
CBI65842 tuf, HPB8_285 elongation factor EF-Tu [Ensembl]. Elongation factor Tu... 0.04 OrthoFinder
CCG26858 No alias Translation elongation factor Tu [Ensembl]. Elongation... 0.03 OrthoFinder
CCL20561 tuf, BN171_70001 Elongation factor EFTu/EF1A [Ensembl]. Elongation factor... 0.16 OrthoFinder
CPC57042 tufA, ERS093114_00830 elongation factor Tu [Ensembl]. Elongation factor Tu... 0.19 OrthoFinder
CRO73354 tuf1_1 Elongation factor Tu [Ensembl]. Elongation factor Tu... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 1 109
IPR004161 EFTu-like_2 133 203
IPR004160 Transl_elong_EFTu/EF1A_C 208 301
No external refs found!