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  5. CCL20481

CCL20481 (BN171_550003)


Aliases : BN171_550003

Description : Transcriptional regulator, TetR family [Ensembl]. Tetracyclin repressor-like, Bacterial regulatory proteins [Interproscan].


Gene families : OG_02_0000023 (OrthoFinder) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20481
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAC74690 uidR, b1618 transcriptional repressor [Ensembl]. Bacterial... 0.05 OrthoFinder
AKI50392 L2625_02581 transcriptional regulator, TetR family [Ensembl].... 0.03 OrthoFinder
CCL19076 BN171_2870006 Transcriptional regulator, TetR family [Ensembl].... 0.04 OrthoFinder
CPC64652 acrR, ERS093114_00946 Transcriptional regulator%2C TetR family [Ensembl].... 0.04 OrthoFinder
CRP03952 kstR2_1 HTH-type transcriptional repressor KstR2 [Ensembl].... 0.05 OrthoFinder
KNA49123 VCV51_030237 tetR family Bacterial regulatory protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015225 biotin transmembrane transporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015655 alanine:sodium symporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0022858 alanine transmembrane transporter activity IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001647 HTH_TetR 19 63
IPR041490 KstR2_TetR_C 86 170
UniProtKB U3X2A0