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  5. CCL20565

CCL20565 (rplW, BN171_70005)


Aliases : rplW, BN171_70005

Description : 50S ribosomal protein L23 [Ensembl]. Ribosomal protein L23 [Interproscan].


Gene families : OG_02_0000400 (OrthoFinder) Phylogenetic Tree(s): OG0000400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20565
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76343 rplW, b3318 50S ribosomal subunit protein L23 [Ensembl]. Ribosomal... 0.23 OrthoFinder
AAK98994 spr0190, rplW 50S Ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.33 OrthoFinder
AAL22301 STM3438, rplW 50S ribosomal subunit protein L23 [Ensembl]. Ribosomal... 0.29 OrthoFinder
ADK86872 rplW, MPNE_0196 ribosomal protein L23 [Ensembl]. Ribosomal protein L23... 0.15 OrthoFinder
AEA92840 rplW, OG1RF_10153 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.28 OrthoFinder
AGT22246 N559_0436 rpL23-SA fusion protein [Ensembl]. 0.16 OrthoFinder
AHY40890 rplW, CJ8421_08590 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
AKI50565 rplW, L2625_02775 ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AKP15125 rplW, WX61_01071 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CBI65719 rplW, HPB8_162 large subunit ribosomal protein L23 [Ensembl]. Ribosomal... 0.24 OrthoFinder
CCG27381 L23Ae LSU ribosomal protein L23p (L23Ae) [Ensembl]. Ribosomal... 0.28 OrthoFinder
CCP43447 rplW, Rv0703 50S ribosomal protein L23 RplW [Ensembl]. Ribosomal... 0.22 OrthoFinder
CPD13571 rplW, ERS093114_02124 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
CRO73798 rplW 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
EDJ91356 rplW, CGSHi22421_04613 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
KNA54974 VCV51_033157 ribosomal protein L23 [Ensembl]. Ribosomal protein L23... 0.2 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013025 Ribosomal_L25/23 6 88
UniProtKB U3X393