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  5. CRN66395

CRN66395 (clpB_1)


Aliases : clpB_1

Description : Heat shock protein F84.1 [Ensembl]. C-terminal, AAA lid domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), ATPase family associated with various cellular activities (AAA) [Interproscan].


Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN66395
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC75641 clpB, b2592 protein disaggregation chaperone [Ensembl]. C-terminal,... 0.16 OrthoFinder
AAK99111 spr0307, clpL ATP-dependent protease ATP-binding subunit [Ensembl].... 0.04 OrthoFinder
AAK99529 spr0725, clpE ATP dependent protease [Ensembl]. C-terminal, AAA lid... 0.02 OrthoFinder
AAL21550 STM2660, clpB ATP-dependent protease [Ensembl]. C-terminal, AAA lid... 0.11 OrthoFinder
ADK87250 clpB, MPNE_0627 chaperone protein ClpB [Ensembl]. AAA lid domain, ATPase... 0.03 OrthoFinder
AEA93131 clpE, OG1RF_10444 ATP-dependent Clp protease [Ensembl]. C-terminal, AAA... 0.03 OrthoFinder
AEA94480 clpB, OG1RF_11793 chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.03 OrthoFinder
AGT23103 N559_1341 protein disaggregation chaperone [Ensembl]. D2-small... 0.14 OrthoFinder
AGT25018 N559_3365 ATP-dependent Clp protease ATP-binding subunit... 0.03 OrthoFinder
AHY39751 CJ8421_02500 ATP-dependent chaperone protein ClpB [Ensembl].... 0.04 OrthoFinder
AKP15926 clpB, WX61_01896 Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.04 OrthoFinder
CBI66855 clpB, HPB8_1298 ATP-dependent Clp protease ATP-binding subunit ClpB... 0.02 OrthoFinder
CBI67148 clpA, HPB8_1591 ATP-dependent Clp protease ATP-binding subunit ClpA... 0.05 OrthoFinder
CCG26873 ClpE ATP-dependent Clp protease, ATP-binding subunit ClpE... 0.05 OrthoFinder
CCG27087 No alias putative ATP-dependent Clp proteinase (ATP-binding... 0.04 OrthoFinder
CCP43114 clpB, Rv0384c Probable endopeptidase ATP binding protein (chain B)... 0.02 OrthoFinder
CPC44266 clpB_1, ERS093114_00454 chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.04 OrthoFinder
CPC57876 clpC, ERS093114_00855 endopeptidase Clp ATP-binding subunit C [Ensembl].... 0.05 OrthoFinder
CRP71014 clpC_3 ATP-dependent Clp protease ATP-binding subunit ClpC... 0.05 OrthoFinder
EDJ91635 CGSHi22421_07768 hypothetical protein [Ensembl]. C-terminal, AAA lid... 0.12 OrthoFinder
KNA57481 VCV51_030464, ClpB ATP-dependent chaperone ClpB [Ensembl]. C-terminal, AAA... 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006109 regulation of carbohydrate metabolic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 342 444
IPR004176 Clp_R_dom 17 68
IPR004176 Clp_R_dom 94 145
IPR003959 ATPase_AAA_core 596 758
IPR019489 Clp_ATPase_C 764 842
IPR003959 ATPase_AAA_core 203 334
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_00144