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  5. CCL20604

CCL20604 (BN171_710002)


Aliases : BN171_710002

Description : Putative drug/sodium antiporter, MATE family [Ensembl]. MatE [Interproscan].


Gene families : OG_02_0000158 (OrthoFinder) Phylogenetic Tree(s): OG0000158_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL20604
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AKI48938 L2625_01019 matE efflux family protein [Ensembl]. Multi... 0.03 OrthoFinder
CCL18372 BN171_2240012 Putative drug/sodium antiporter, MATE family [Ensembl].... 0.06 OrthoFinder
CCL19660 BN171_3360001 Putative multi antimicrobial extrusion protein,MatE... 0.05 OrthoFinder
KNA59916 VCV51_032327, VcmN multidrug efflux pump VcmN [Ensembl]. MatE [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR002528 MATE_fam 26 186
IPR002528 MATE_fam 247 406
UniProtKB U3X689