CRP03013 (gltC_5)


Aliases : gltC_5

Description : HTH-type transcriptional regulator GltC [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP03013
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC75590 hcaR, b2537 hca operon transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AEA93759 OG1RF_11072 transcriptional regulator [Ensembl]. LysR substrate... 0.03 OrthoFinder
AEA93760 OG1RF_11073 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AEA94108 OG1RF_11421 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AEA94928 OG1RF_12241 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT23181 N559_1423 LysR family transcriptional regulator [Ensembl]. LysR... 0.05 OrthoFinder
AGT23255 N559_1502 putative LysR-family transcriptional regulator... 0.04 OrthoFinder
AGT23273 N559_1520, CynR DNA-binding transcriptional regulator CynR [Ensembl].... 0.04 OrthoFinder
AGT23447 N559_1705 LysR family transcriptional regulator [Ensembl]. LysR... 0.05 OrthoFinder
AGT23946 N559_2239 LysR family transcriptional regulator [Ensembl]. LysR... 0.04 OrthoFinder
AGT24322 N559_2646, LysR transcriptional regulator LysR [Ensembl]. LysR substrate... 0.05 OrthoFinder
AGT24668 N559_3005, CysB transcriptional regulator CysB [Ensembl]. LysR substrate... 0.04 OrthoFinder
AGT24793 N559_3132 LysR family transcriptional regulator [Ensembl]. LysR... 0.04 OrthoFinder
AGT26606 N559_5029, OxyR DNA-binding transcriptional regulator OxyR [Ensembl].... 0.03 OrthoFinder
AGT26618 N559_5041 putative LysR-family transcriptional regulator... 0.04 OrthoFinder
CCL17254 BN171_1410016 Transcriptional regulator, LysR family [Ensembl]. LysR... 0.04 OrthoFinder
CCL19137 BN171_2880004 Transcriptional regulator, LysR family [Ensembl]. LysR... 0.03 OrthoFinder
CPC63513 cidR, ERS093114_00910 LysR family regulatory protein CidR [Ensembl]. LysR... 0.03 OrthoFinder
CRO37348 benM_3 Ben and cat operon transcriptional regulator [Ensembl].... 0.04 OrthoFinder
CRO86371 oxyR_2 Morphology and auto-aggregation control protein... 0.06 OrthoFinder
CRP00540 cysL_3 CysJI operon transcriptional activator [Ensembl]. LysR... 0.06 OrthoFinder
CRP01952 cmpR_2 HTH-type transcriptional activator CmpR [Ensembl]. LysR... 0.03 OrthoFinder
KNA59752 VCV51_032447 lysR family Bacterial regulatory helix-turn-helix... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016994 precorrin-6A reductase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 3 61
IPR005119 LysR_subst-bd 87 290