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CRP05530 (gmr_7)


Aliases : gmr_7

Description : Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. PAS fold, PAS domain, EAL domain, Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP05530
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC74252 pdeG, b1168 putative membrane-anchored cyclic-di-GMP... 0.03 OrthoFinder
AAC75237 pdeN, b2176 resistance protein for phages lambda and N4, putative... 0.03 OrthoFinder
AAC77031 pdeC, b4061 putative membrane-anchored cyclic-di-GMP... 0.04 OrthoFinder
AGT24937 N559_3279 diguanylate phosphodiesterase [Ensembl]. EAL domain... 0.03 OrthoFinder
AGT25611 N559_3980 cyclic diguanylate phosphodiesterase domain protein... 0.03 OrthoFinder
CCL16934 BN171_1020001 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CCL18073 BN171_210009 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
CCL19229 BN171_2970008 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
CRP17759 cph2_7 Bacteriophytochrome cph2 [Ensembl]. EAL domain, Response... 0.05 OrthoFinder
KNA59789 VCV51_032484 EAL domain-containing protein [Ensembl]. GAF domain, EAL... 0.04 OrthoFinder
KNA60571 VCV51_032242 EAL domain-containing protein [Ensembl]. EAL domain,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 412 513
IPR013655 PAS_fold_3 318 386
IPR001633 EAL_dom 704 937
IPR000160 GGDEF_dom 527 682
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_04252