CRP79684 (zraR_6)

Aliases : zraR_6

Description : Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].

Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP79684
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AAC75280	atoC, b2220	fused response regulator of ato operon, in two-component...	0.03	OrthoFinder
AAL19321	STM0367, prpR	regulator for prp operon (EBP family) [Ensembl]....	0.03	OrthoFinder
AAL21456	STM2562, yfhA	putative transcriptional regulator of two-component...	0.02	OrthoFinder
AAL21739	STM2859, fhlA	formate hydrogen-lyase transcriptional activator for...	0.02	OrthoFinder
AGT26495	N559_4911	fused DNA-binding response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL18448	BN171_2340008	Transcriptional regulator, sigma-54-dependent [Ensembl]....	0.03	OrthoFinder
CRN65608	qseF	Quorum-sensing regulator protein F [Ensembl]. Sigma-54...	0.03	OrthoFinder
KNA50400	VCV51_031426	sigma-54 interaction domain-containing protein...	0.11	OrthoFinder
KNA55086	VCV51_031847	nitrogen regulation protein NR(I) [Ensembl]. Sigma-54...	0.06	OrthoFinder
KNA58956	VCV51_031243	sigma-54 interaction domain-containing protein...	0.03	OrthoFinder
KNA59396	VCV51_031296	sigma-54 interaction domain-containing protein...	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
MF	GO:0008134	transcription factor binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Enrichment
BP	GO:0001539	cilium or flagellum-dependent cell motility	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0004040	amidase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0004673	protein histidine kinase activity	IEP	Enrichment
MF	GO:0005198	structural molecule activity	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
BP	GO:0006605	protein targeting	IEP	Enrichment
BP	GO:0006612	protein targeting to membrane	IEP	Enrichment
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006886	intracellular protein transport	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0006935	chemotaxis	IEP	Enrichment
CC	GO:0009288	bacterial-type flagellum	IEP	Enrichment
CC	GO:0009425	bacterial-type flagellum basal body	IEP	Enrichment
CC	GO:0009427	bacterial-type flagellum basal body, distal rod, L ring	IEP	Enrichment
CC	GO:0009428	bacterial-type flagellum basal body, distal rod, P ring	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0030030	cell projection organization	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
CC	GO:0030288	outer membrane-bounded periplasmic space	IEP	Enrichment
BP	GO:0032101	regulation of response to external stimulus	IEP	Enrichment
BP	GO:0033365	protein localization to organelle	IEP	Enrichment
BP	GO:0034613	cellular protein localization	IEP	Enrichment
BP	GO:0040011	locomotion	IEP	Enrichment
BP	GO:0040012	regulation of locomotion	IEP	Enrichment
BP	GO:0042330	taxis	IEP	Enrichment
CC	GO:0042995	cell projection	IEP	Enrichment
CC	GO:0043226	organelle	IEP	Enrichment
CC	GO:0043228	non-membrane-bounded organelle	IEP	Enrichment
BP	GO:0044780	bacterial-type flagellum assembly	IEP	Enrichment
BP	GO:0044781	bacterial-type flagellum organization	IEP	Enrichment
BP	GO:0045047	protein targeting to ER	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
BP	GO:0048583	regulation of response to stimulus	IEP	Enrichment
BP	GO:0048870	cell motility	IEP	Enrichment
BP	GO:0050920	regulation of chemotaxis	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment
BP	GO:0051668	localization within membrane	IEP	Enrichment
BP	GO:0070727	cellular macromolecule localization	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0071973	bacterial-type flagellum-dependent cell motility	IEP	Enrichment
BP	GO:0072594	establishment of protein localization to organelle	IEP	Enrichment
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0072657	protein localization to membrane	IEP	Enrichment
BP	GO:0090150	establishment of protein localization to membrane	IEP	Enrichment
BP	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
MF	GO:0140299	small molecule sensor activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	5	114
IPR002197	HTH_Fis	419	458
IPR002078	Sigma_54_int	135	296

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_06468

CRP79684 (zraR_6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation