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  5. KNA48025

KNA48025 (VCV51_033860)


Aliases : VCV51_033860

Description : ATP-dependent DNA helicase Rep [Ensembl]. UvrD/REP helicase N-terminal domain, UvrD-like helicase C-terminal domain [Interproscan].


Gene families : OG_02_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA48025
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAK99799 spr0995, pcrA ATP-dependent DNA helicase [Ensembl]. UvrD/REP helicase... 0.03 OrthoFinder
AAK99844 spr1040, rexA First subunit of major exonuclease [Ensembl]. PD-(D/E)XK... 0.03 OrthoFinder
AAL22795 STM3951, uvrD DNA-dependent ATPase I and helicase II [Ensembl].... 0.03 OrthoFinder
AEA93145 pcrA, OG1RF_10458 ATP-dependent DNA helicase PcrA [Ensembl]. UvrD/REP... 0.03 OrthoFinder
AGT26590 N559_5009 ATP-dependent DNA helicase Rep [Ensembl]. UvrD-like... 0.04 OrthoFinder
AKP16203 rep, WX61_02179 ATP-dependent DNA helicase Rep [Ensembl]. UvrD/REP... 0.04 OrthoFinder
CCL17180 BN171_1360002 Putative helicase, superfamily 1, UvrD-family [Ensembl].... 0.04 OrthoFinder
CPC44488 addA, ERS093114_00461 ATP-dependent nuclease%2C subunit A [Ensembl].... 0.02 OrthoFinder
CRO28795 rep ATP-dependent DNA helicase rep [Ensembl]. UvrD/REP... 0.07 OrthoFinder
CRP05563 uvrD_2 DNA helicase II [Ensembl]. UvrD/REP helicase N-terminal... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0033739 preQ1 synthase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050380 undecaprenyl-diphosphatase activity IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR014017 DNA_helicase_UvrD-like_C 271 615
No external refs found!