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  5. KNA49129

KNA49129 (VCV51_030231)


Aliases : VCV51_030231

Description : ribosomal protein L7/L12 [Ensembl]. Ribosomal protein L7/L12 C-terminal domain, Ribosomal protein L7/L12 dimerisation domain [Interproscan].


Gene families : OG_02_0000364 (OrthoFinder) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA49129
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC76960 rplL, b3986 50S ribosomal subunit protein L7/L12 [Ensembl].... 0.15 OrthoFinder
AAL00015 spr1211, rplL 50S Ribosomal protein L12 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AAL22980 STM4152, rplL 50S ribosomal subunit protein L7/L12 [Ensembl].... 0.4 OrthoFinder
ADK86807 rplL, MPNE_0637 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AEA94767 rplL2, OG1RF_12080 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
AGT26518 N559_4934 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.17 OrthoFinder
AHY39730 rplL, CJ8421_02385 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.12 OrthoFinder
AKI48218 rplL, L2625_00269 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AKP15110 rplL, WX61_01056 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.09 OrthoFinder
CBI65849 rplL, HPB8_292 large subunit ribosomal protein L7/L12 [Ensembl].... 0.14 OrthoFinder
CCG27670 P1/P2 LSU ribosomal protein L7/L12 (P1/P2) [Ensembl].... 0.11 OrthoFinder
CCL20642 rplL, BN171_80007 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.12 OrthoFinder
CCP43395 rplL, Rv0652 50S ribosomal protein L7/L12 RplL (SA1) [Ensembl].... 0.08 OrthoFinder
CPC57334 rplL, ERS093114_00838 50S ribosomalprotein L7/L12 (L23e) [Ensembl]. Ribosomal... 0.19 OrthoFinder
CRO73528 rplL Ribosomal protein 'A' [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
EDJ90229 rplL, CGSHi22421_05057 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.08 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 55 121
IPR008932 Ribosomal_L7/L12_oligo 4 48
No external refs found!