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  5. KNA51854

KNA51854 (VCV51_030386, HrpB)


Aliases : VCV51_030386, HrpB

Description : ATP-dependent helicase HrpB [Ensembl]. DEAD/DEAH box helicase, Helicase associated domain (HA2), ATP-dependent helicase C-terminal, Helicase conserved C-terminal domain [Interproscan].


Gene families : OG_02_0002241 (OrthoFinder) Phylogenetic Tree(s): OG0002241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA51854
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC73259 hrpB, b0148 putative ATP-dependent helicase [Ensembl]. Helicase... 0.05 OrthoFinder
AAL19153 STM0189, hrpB ATP-dependent helicase [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR013689 RNA_helicase_ATP-dep_HrpB_C 664 796
IPR001650 Helicase_C 197 317
IPR011545 DEAD/DEAH_box_helicase_dom 10 156
IPR007502 Helicase-assoc_dom 378 442
No external refs found!