AEA94129 (mdlB, OG1RF_11442)

Aliases : mdlB, OG1RF_11442

Description : multidrug ABC superfamily ATP binding cassette transporter, ABC protein [Ensembl]. ABC transporter transmembrane region [Interproscan].

Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AEA94129
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AAC74000	msbA, b0914	lipid ABC transporter permease/ATPase [Ensembl]. ABC...	0.01	OrthoFinder
AAL00019	spr1215, ABC-N/P	ABC transporter ATP-binding/membrane-spanning...	0.02	OrthoFinder
AAL00020	spr1216, ABC-N/P	ABC transporter ATP-binding/membrane-spanning...	0.02	OrthoFinder
AAL19918	STM0984, msbA	multicopy repressor of htrB transport protein; ABC...	0.01	OrthoFinder
AEA94658	OG1RF_11971	multidrug resistance ABC superfamily ATP binding...	0.01	OrthoFinder
AGT24993	N559_3337	lipid transporter ATP-binding/permease protein...	0.01	OrthoFinder
AKI48785	L2625_00857	ABC transporter, ATP-binding/permease protein [Ensembl]....	0.01	OrthoFinder
CCG27494	No alias	ABC transporter, ATP-binding/permease protein [Ensembl]....	0.03	OrthoFinder
CCG27495	No alias	ABC transporter, ATP-binding/permease protein [Ensembl]....	0.05	OrthoFinder
CCL17259	BN171_1420002	ABC-type transport system, multidrug-family...	0.01	OrthoFinder
CPD01712	ERS093114_01834	Lipid A export ATP-binding/permease protein MsbA...	0.01	OrthoFinder
CRO55966	msbA	Lipid A export ATP-binding/permease protein MsbA...	0.03	OrthoFinder
KNA59439	VCV51_031273, MsbA	lipid A export permease/ATP-binding protein MsbA...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	371	520
IPR011527	ABC1_TM_dom	39	309

External Links

No external refs found!

AEA94129 (mdlB, OG1RF_11442)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation