Aliases : ybeY, b0659
Description : ssRNA-specific endoribonuclease; 16S rRNA 3' end maturation and quality control co-endoribonuclease working with RNase R; rRNA transcription antitermination factor [Ensembl]. Uncharacterized protein family UPF0054 [Interproscan].
Gene families : OG_02_0000424 (OrthoFinder) Phylogenetic Tree(s): OG0000424_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAC73760 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT25279 | N559_3637 | putative metalloprotease [Ensembl]. Uncharacterized... | 0.03 | OrthoFinder | |
CCP45155 | Rv2367c | Conserved hypothetical protein [Ensembl].... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004222 | metalloendopeptidase activity | IEA | Interproscan |
BP | GO:0006364 | rRNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Enrichment |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006457 | protein folding | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0031072 | heat shock protein binding | IEP | Enrichment |
BP | GO:0032259 | methylation | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | Enrichment |
MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002036 | YbeY | 20 | 142 |
UniProtKB | P0A898 |