Coexpression cluster: Cluster_23 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044255 cellular lipid metabolic process 10.87% (5/46) 3.91 1.6e-05 0.001719
GO:0009058 biosynthetic process 26.09% (12/46) 2.12 1e-05 0.002243
GO:0006629 lipid metabolic process 10.87% (5/46) 3.68 3.4e-05 0.002505
GO:0016757 glycosyltransferase activity 8.7% (4/46) 4.17 5.7e-05 0.003109
GO:0008654 phospholipid biosynthetic process 6.52% (3/46) 4.75 0.000146 0.003196
GO:0006644 phospholipid metabolic process 6.52% (3/46) 4.75 0.000146 0.003196
GO:0007059 chromosome segregation 4.35% (2/46) 6.49 0.000121 0.003307
GO:0006323 DNA packaging 4.35% (2/46) 6.49 0.000121 0.003307
GO:0030261 chromosome condensation 4.35% (2/46) 6.49 0.000121 0.003307
GO:0008610 lipid biosynthetic process 8.7% (4/46) 3.91 0.000121 0.00528
GO:0016874 ligase activity 10.87% (5/46) 3.03 0.000312 0.006204
GO:0042727 flavin-containing compound biosynthetic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0006664 glycolipid metabolic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0006643 membrane lipid metabolic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0046493 lipid A metabolic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0042726 flavin-containing compound metabolic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0009245 lipid A biosynthetic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:1901269 lipooligosaccharide metabolic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:1901271 lipooligosaccharide biosynthetic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0046467 membrane lipid biosynthetic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0009247 glycolipid biosynthetic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0006771 riboflavin metabolic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0009231 riboflavin biosynthetic process 4.35% (2/46) 5.49 0.000715 0.006521
GO:0016740 transferase activity 21.74% (10/46) 1.67 0.000829 0.007264
GO:0090407 organophosphate biosynthetic process 8.7% (4/46) 3.4 0.000485 0.008852
GO:0016763 pentosyltransferase activity 4.35% (2/46) 5.17 0.001183 0.009249
GO:0009312 oligosaccharide biosynthetic process 4.35% (2/46) 5.17 0.001183 0.009249
GO:0044249 cellular biosynthetic process 17.39% (8/46) 1.88 0.001168 0.009841
GO:1901576 organic substance biosynthetic process 17.39% (8/46) 1.81 0.001615 0.012195
GO:0051301 cell division 4.35% (2/46) 4.91 0.001761 0.012857
GO:0019637 organophosphate metabolic process 8.7% (4/46) 2.76 0.002625 0.018547
GO:0009311 oligosaccharide metabolic process 4.35% (2/46) 4.49 0.003241 0.022183
GO:0071103 DNA conformation change 4.35% (2/46) 4.32 0.004138 0.025892
GO:0016758 hexosyltransferase activity 4.35% (2/46) 4.32 0.004138 0.025892
GO:0003824 catalytic activity 43.48% (20/46) 0.81 0.004068 0.026994
GO:0006796 phosphate-containing compound metabolic process 8.7% (4/46) 2.49 0.005212 0.030848
GO:1903509 liposaccharide metabolic process 4.35% (2/46) 4.17 0.005136 0.031245
GO:0051276 chromosome organization 4.35% (2/46) 4.03 0.006233 0.035923
GO:0006793 phosphorus metabolic process 8.7% (4/46) 2.38 0.006811 0.038245
GO:0004523 RNA-DNA hybrid ribonuclease activity 2.17% (1/46) 6.49 0.011111 0.039247
GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity 2.17% (1/46) 6.49 0.011111 0.039247
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity 2.17% (1/46) 6.49 0.011111 0.039247
GO:0008915 lipid-A-disaccharide synthase activity 2.17% (1/46) 6.49 0.011111 0.039247
GO:0019682 glyceraldehyde-3-phosphate metabolic process 2.17% (1/46) 6.49 0.011111 0.039247
GO:0010033 response to organic substance 2.17% (1/46) 6.49 0.011111 0.039247
GO:0046490 isopentenyl diphosphate metabolic process 2.17% (1/46) 6.49 0.011111 0.039247
GO:0030259 lipid glycosylation 2.17% (1/46) 6.49 0.011111 0.039247
GO:0050992 dimethylallyl diphosphate biosynthetic process 2.17% (1/46) 6.49 0.011111 0.039247
GO:0050993 dimethylallyl diphosphate metabolic process 2.17% (1/46) 6.49 0.011111 0.039247
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 2.17% (1/46) 6.49 0.011111 0.039247
GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor 2.17% (1/46) 6.49 0.011111 0.039247
GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity 2.17% (1/46) 6.49 0.011111 0.039247
GO:0009240 isopentenyl diphosphate biosynthetic process 2.17% (1/46) 6.49 0.011111 0.039247
GO:0017038 protein import 2.17% (1/46) 6.49 0.011111 0.039247
GO:0003919 FMN adenylyltransferase activity 2.17% (1/46) 6.49 0.011111 0.039247
GO:0009349 riboflavin synthase complex 2.17% (1/46) 6.49 0.011111 0.039247
GO:0008531 riboflavin kinase activity 2.17% (1/46) 6.49 0.011111 0.039247
GO:0008152 metabolic process 32.61% (15/46) 0.93 0.0073 0.039968
GO:0006996 organelle organization 4.35% (2/46) 3.58 0.011568 0.040214
GO:0009110 vitamin biosynthetic process 4.35% (2/46) 3.79 0.008716 0.043381
GO:0006767 water-soluble vitamin metabolic process 4.35% (2/46) 3.79 0.008716 0.043381
GO:0006766 vitamin metabolic process 4.35% (2/46) 3.79 0.008716 0.043381
GO:0042364 water-soluble vitamin biosynthetic process 4.35% (2/46) 3.79 0.008716 0.043381
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_1 0.028 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_30 0.039 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_10 0.035 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_7 0.038 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.09 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_1 0.033 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_8 0.029 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_12 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.053 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_26 0.042 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_39 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_54 0.033 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_24 0.036 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_13 0.036 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_14 0.05 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.038 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_7 0.03 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_22 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_24 0.09 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_40 0.045 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_43 0.028 OrthoFinder Compare
Salmonella enterica HCCA Cluster_3 0.031 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.039 OrthoFinder Compare
Salmonella enterica HCCA Cluster_45 0.031 OrthoFinder Compare
Salmonella enterica HCCA Cluster_47 0.145 OrthoFinder Compare
Salmonella enterica HCCA Cluster_48 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_27 0.043 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_16 0.061 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_7 0.031 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.028 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_18 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_1 0.027 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_12 0.068 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_31 0.036 OrthoFinder Compare
Sequences (46) (download table)

InterPro Domains

GO Terms

Family Terms