Coexpression cluster: Cluster_29 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901360 organic cyclic compound metabolic process 18.52% (20/108) 1.47 2.2e-05 0.002473
GO:0006725 cellular aromatic compound metabolic process 18.52% (20/108) 1.49 1.8e-05 0.00299
GO:0046483 heterocycle metabolic process 18.52% (20/108) 1.49 1.7e-05 0.005662
GO:0022603 regulation of anatomical structure morphogenesis 1.85% (2/108) 5.26 0.000674 0.017379
GO:0008360 regulation of cell shape 1.85% (2/108) 5.26 0.000674 0.017379
GO:0050793 regulation of developmental process 1.85% (2/108) 5.26 0.000674 0.017379
GO:0022604 regulation of cell morphogenesis 1.85% (2/108) 5.26 0.000674 0.017379
GO:0006807 nitrogen compound metabolic process 21.3% (23/108) 1.0 0.000797 0.017805
GO:0006139 nucleobase-containing compound metabolic process 14.81% (16/108) 1.35 0.000429 0.017967
GO:0016740 transferase activity 15.74% (17/108) 1.21 0.000858 0.017968
GO:0000166 nucleotide binding 16.67% (18/108) 1.3 0.000283 0.018931
GO:1901265 nucleoside phosphate binding 16.67% (18/108) 1.3 0.000283 0.018931
GO:0032553 ribonucleotide binding 13.89% (15/108) 1.32 0.000795 0.019016
GO:0005524 ATP binding 12.04% (13/108) 1.35 0.001486 0.019915
GO:0032559 adenyl ribonucleotide binding 12.04% (13/108) 1.35 0.001557 0.020065
GO:0030554 adenyl nucleotide binding 12.04% (13/108) 1.34 0.001631 0.020239
GO:0034641 cellular nitrogen compound metabolic process 17.59% (19/108) 1.2 0.000424 0.020298
GO:0017076 purine nucleotide binding 12.96% (14/108) 1.29 0.001459 0.020369
GO:0097367 carbohydrate derivative binding 13.89% (15/108) 1.24 0.001458 0.021243
GO:0032555 purine ribonucleotide binding 12.96% (14/108) 1.3 0.001396 0.021261
GO:1901363 heterocyclic compound binding 25.93% (28/108) 0.82 0.00135 0.02153
GO:0097159 organic cyclic compound binding 25.93% (28/108) 0.82 0.00135 0.02153
GO:0016070 RNA metabolic process 7.41% (8/108) 1.92 0.001094 0.021566
GO:0034470 ncRNA processing 3.7% (4/108) 3.01 0.001255 0.022124
GO:0043168 anion binding 16.67% (18/108) 1.26 0.0004 0.02232
GO:0036094 small molecule binding 17.59% (19/108) 1.16 0.000604 0.022483
GO:0035639 purine ribonucleoside triphosphate binding 12.96% (14/108) 1.32 0.001221 0.022718
GO:0017150 tRNA dihydrouridine synthase activity 1.85% (2/108) 4.68 0.001989 0.022972
GO:0019205 nucleobase-containing compound kinase activity 1.85% (2/108) 4.68 0.001989 0.022972
GO:0008168 methyltransferase activity 4.63% (5/108) 2.37 0.002467 0.027552
GO:0005488 binding 30.56% (33/108) 0.67 0.002739 0.029602
GO:0090304 nucleic acid metabolic process 11.11% (12/108) 1.31 0.002861 0.029956
GO:0140098 catalytic activity, acting on RNA 5.56% (6/108) 2.01 0.003376 0.03427
GO:0006281 DNA repair 3.7% (4/108) 2.62 0.003631 0.034749
GO:0043167 ion binding 17.59% (19/108) 0.95 0.003621 0.035676
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 2.78% (3/108) 3.15 0.004081 0.037975
GO:0044237 cellular metabolic process 21.3% (23/108) 0.8 0.004932 0.043481
GO:0034660 ncRNA metabolic process 4.63% (5/108) 2.16 0.004814 0.043585
GO:0006974 cellular response to DNA damage stimulus 3.7% (4/108) 2.45 0.005534 0.047536
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_1 0.039 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_7 0.06 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_19 0.031 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_26 0.03 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_30 0.043 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_7 0.034 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_17 0.032 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_21 0.033 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_29 0.027 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_6 0.033 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_7 0.05 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_8 0.046 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.038 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_15 0.043 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_19 0.038 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_1 0.045 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_26 0.141 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.047 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_39 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_40 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_44 0.083 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_45 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_54 0.055 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_12 0.028 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_14 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.054 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_24 0.032 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_28 0.042 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_1 0.038 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_8 0.04 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_11 0.033 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.032 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_16 0.036 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_17 0.028 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_22 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_34 0.094 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_35 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_40 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_51 0.05 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_52 0.035 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_53 0.039 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_62 0.032 OrthoFinder Compare
Salmonella enterica HCCA Cluster_3 0.135 OrthoFinder Compare
Salmonella enterica HCCA Cluster_7 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.125 OrthoFinder Compare
Salmonella enterica HCCA Cluster_32 0.054 OrthoFinder Compare
Salmonella enterica HCCA Cluster_41 0.027 OrthoFinder Compare
Salmonella enterica HCCA Cluster_42 0.03 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_5 0.059 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_15 0.03 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_14 0.031 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_18 0.055 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.052 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_16 0.04 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_18 0.038 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_1 0.05 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_11 0.051 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_17 0.027 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.087 OrthoFinder Compare
Sequences (108) (download table)

InterPro Domains

GO Terms

Family Terms