AHY40431 (CJ8421_06120)

Aliases : CJ8421_06120

Description : DNA-binding response regulator [Ensembl]. Transcriptional regulatory protein, Response regulator receiver domain [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AHY40431
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
AAC73672	cusR, b0571	response regulator in two-component regulatory system...	0.01	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.01	OrthoFinder
AAC76430	ompR, b3405	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAC76894	cpxR, b3912	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAC77074	basR, b4113	response regulator in two-component regulatory system...	0.02	OrthoFinder
AAK99140	spr0336, csrR	Response regulator [Ensembl]. Transcriptional regulatory...	0.03	OrthoFinder
AAL23116	STM4292, basR	response regulator in two-component regulatory system...	0.02	OrthoFinder
AEA92946	OG1RF_10259	response regulator [Ensembl]. Response regulator...	0.04	OrthoFinder
AGT22533	N559_0740, QseB	DNA-binding transcriptional regulator QseB [Ensembl]....	0.03	OrthoFinder
AGT25177	N559_3529, BasR	DNA-binding transcriptional regulator BasR [Ensembl]....	0.02	OrthoFinder
AGT26636	N559_5059, CpxR	DNA-binding transcriptional regulator CpxR [Ensembl]....	0.02	OrthoFinder
AGT26862	N559_5288	Transcriptional regulatory protein pcoR [Ensembl]....	0.03	OrthoFinder
AGT26875	N559_5301, CusR	DNA-binding transcriptional activator CusR [Ensembl]....	0.02	OrthoFinder
AKI48258	L2625_00311	DNA-binding response regulator [Ensembl]. OmpR/PhoB-type...	0.03	OrthoFinder
AKP15489	ompR, WX61_01443	Transcriptional regulatory protein OmpR [Ensembl]....	0.03	OrthoFinder
CBI67093	HPB8_1536	two-component system, OmpR family, response regulator...	0.04	OrthoFinder
CCL18125	kdpE, BN171_2100009	Two-component response regulator KdpE [Ensembl]....	0.03	OrthoFinder
CCL18472	BN171_2380003	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL19189	BN171_2930004	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL20068	BN171_3690012	Two-component response regulator, CheY family [Ensembl]....	0.03	OrthoFinder
CCL20618	BN171_750002	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL20655	BN171_830005	Two-component response regulator [Ensembl]. Response...	0.04	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.01	OrthoFinder
CRO19997	qseB_2	Transcriptional regulatory protein QseB [Ensembl]....	0.04	OrthoFinder
CRO24960	ompR_1	Transcriptional regulatory protein OmpR [Ensembl]....	0.03	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
CRP43486	qseB_3	Transcriptional regulatory protein QseB [Ensembl]....	0.02	OrthoFinder
CRP45027	ompR_4	Transcriptional regulatory protein OmpR [Ensembl]....	0.02	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
KNA54887	VCV51_031804	response regulator receiver domain-containing protein...	0.03	OrthoFinder
KNA55120	VCV51_031823	response regulator receiver domain-containing protein...	0.03	OrthoFinder
KNA55649	VCV51_033016	response regulator receiver domain-containing protein...	0.03	OrthoFinder
KNA60550	VCV51_032221	response regulator receiver domain-containing protein...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
BP	GO:0009306	protein secretion	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016866	intramolecular transferase activity	IEP	Enrichment
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
BP	GO:0071692	protein localization to extracellular region	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	146	222
IPR001789	Sig_transdc_resp-reg_receiver	4	113

External Links

No external refs found!

AHY40431 (CJ8421_06120)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation