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  5. CBI66873

CBI66873 (deaD, HPB8_1316)


Aliases : deaD, HPB8_1316

Description : putative helicase [Ensembl]. DEAD/DEAH box helicase, Helicase conserved C-terminal domain [Interproscan].


Gene families : OG_02_0000033 (OrthoFinder) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CBI66873
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC75629 srmB, b2576 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
AAL21537 STM2643, srmB ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
AAL22764 STM3914, rhlB putative helicase [Ensembl]. DEAD/DEAH box helicase,... 0.02 OrthoFinder
AEA93263 srmB, OG1RF_10576 ATP-dependent RNA helicase DeaD [Ensembl]. DEAD/DEAH box... 0.02 OrthoFinder
AEA93852 OG1RF_11165 DEAD/DEAH box family ATP-dependent RNA helicase... 0.02 OrthoFinder
AGT26585 N559_5004, RhlB ATP-dependent RNA helicase RhlB [Ensembl]. Helicase... 0.03 OrthoFinder
AKI48814 L2625_00887 ATP-dependent RNA helicase [Ensembl]. Helicase,... 0.04 OrthoFinder
AKI49240 dbpA, L2625_01332 ATP-dependent RNA helicase [Ensembl]. Helicase,... 0.03 OrthoFinder
AKI49447 L2625_01548 ATP-dependent RNA helicase, putative [Ensembl].... 0.04 OrthoFinder
AKI49716 L2625_01857 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
CCG27185 YqfR ATP-dependent RNA helicase YqfR [Ensembl]. DEAD/DEAH box... 0.04 OrthoFinder
CCL18463 BN171_2360005 Putative ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH... 0.02 OrthoFinder
CCP46027 rhlE, Rv3211 Probable ATP-dependent RNA helicase RhlE [Ensembl].... 0.02 OrthoFinder
CPC81511 cshB, ERS093114_01388 ATP-dependent RNA helicase YqfR [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
CRO01721 rhlB ATP-dependent RNA helicase RhlB [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
CRO08405 rhlE_1 ATP-dependent RNA helicase RhlE [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
CRO88221 rhlE_2 ATP-dependent RNA helicase RhlE [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder
EDJ90863 CGSHi22421_05540 preprotein translocase subunit SecF [Ensembl]. DEAD/DEAH... 0.03 OrthoFinder
EDJ91675 CGSHi22421_07968 ATP-dependent RNA helicase [Ensembl]. DEAD/DEAH box... 0.03 OrthoFinder
KNA57620 VCV51_030433 DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box... 0.05 OrthoFinder
KNA60724 VCV51_032163 DEAD/DEAH box helicase [Ensembl]. DEAD/DEAH box... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 45 209
IPR001650 Helicase_C 245 352
UniProtKB D7FFB6