Aliases : ligA, L2625_01894
Description : DNA ligase, NAD-dependent [Ensembl]. NAD-dependent DNA ligase, BRCT domain, DisA/LigA, Zinc-finger [Interproscan].
Gene families : OG_02_0000445 (OrthoFinder) Phylogenetic Tree(s): OG0000445_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AKI49752 | |
Cluster | HCCA: Cluster_14 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAK99828 | spr1024, ligA | DNA ligase [Ensembl]. Helix-hairpin-helix motif,... | 0.05 | OrthoFinder | |
AGT23252 | N559_1499, LigA | NAD-dependent DNA ligase LigA [Ensembl]. NAD-dependent... | 0.03 | OrthoFinder | |
AHY39823 | ligA, CJ8421_02860 | NAD-dependent DNA ligase LigA [Ensembl].... | 0.03 | OrthoFinder | |
CPD03240 | lig, ERS093114_01872 | DNA ligase [Ensembl]. Helix-hairpin-helix motif,... | 0.07 | OrthoFinder | |
EDJ91896 | ligA, CGSHi22421_09073 | NAD-dependent DNA ligase LigA [Ensembl].... | 0.03 | OrthoFinder | |
KNA56407 | VCV51_030679 | DNA ligase [Ensembl]. Helix-hairpin-helix motif,... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003911 | DNA ligase (NAD+) activity | IEA | Interproscan |
BP | GO:0006260 | DNA replication | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0004518 | nuclease activity | IEP | Enrichment |
MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006265 | DNA topological change | IEP | Enrichment |
BP | GO:0006996 | organelle organization | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
MF | GO:0008144 | drug binding | IEP | Enrichment |
MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
MF | GO:0008658 | penicillin binding | IEP | Enrichment |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0033218 | amide binding | IEP | Enrichment |
MF | GO:0033293 | monocarboxylic acid binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0043177 | organic acid binding | IEP | Enrichment |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Enrichment |
BP | GO:0051276 | chromosome organization | IEP | Enrichment |
BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
No external refs found! |