CCL18680 (BN171_2480055)


Aliases : BN171_2480055

Description : Transcription antiterminator, PTS operon regulator [Ensembl]. PTS system fructose IIA component, Phosphoenolpyruvate-dependent sugar phosphotransferase system, PRD domain, Sigma-54 interaction domain [Interproscan].


Gene families : OG_02_0000294 (OrthoFinder) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL18680
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AGT25417 N559_3781 putative inner membrane protein [Ensembl]. PRD domain,... 0.01 OrthoFinder
AGT26093 N559_4488 sigma-54 dependent transcriptional regulator [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002078 Sigma_54_int 119 284
IPR004701 PTS_EIIA_man-typ 597 696
IPR011608 PRD 503 586
IPR002178 PTS_EIIA_type-2_dom 829 961
UniProtKB U3WY54