Aliases : STM0404, queA
Description : S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Ensembl]. Queuosine biosynthesis protein [Interproscan].
Gene families : OG_02_0000526 (OrthoFinder) Phylogenetic Tree(s): OG0000526_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL19358 | |
Cluster | HCCA: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC73508 | queA, b0405 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase... | 0.14 | OrthoFinder | |
AGT25681 | N559_4053 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ensembl]. | 0.07 | OrthoFinder | |
CCL19296 | queA, BN171_3020008 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase... | 0.03 | OrthoFinder | |
CRO02848 | queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase... | 0.1 | OrthoFinder | |
KNA56852 | VCV51_030489 | tRNA ribosyltransferase-isomerase [Ensembl]. Queuosine... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008616 | queuosine biosynthetic process | IEA | Interproscan |
MF | GO:0016740 | transferase activity | IEA | Interproscan |
MF | GO:0016853 | isomerase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0004127 | cytidylate kinase activity | IEP | Enrichment |
MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Enrichment |
MF | GO:0004810 | tRNA adenylyltransferase activity | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006400 | tRNA modification | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008990 | rRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Enrichment |
MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
MF | GO:1990817 | RNA adenylyltransferase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003699 | QueA | 4 | 343 |
No external refs found! |