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  5. AAL19735

AAL19735 (STM0798, uvrB)


Aliases : STM0798, uvrB

Description : UvrB with UvrAC is a DNA excision repair enzyme [Ensembl]. UvrB/uvrC motif, UvrB interaction domain, Type III restriction enzyme, Ultra-violet resistance protein B, Helicase conserved C-terminal domain [Interproscan].


Gene families : OG_02_0000531 (OrthoFinder) Phylogenetic Tree(s): OG0000531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19735
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC73866 uvrB, b0779 exision nuclease of nucleotide excision repair, DNA... 0.03 OrthoFinder
AEA93184 uvrB, OG1RF_10497 excision endonuclease subunit UvrB [Ensembl]. UvrB/uvrC... 0.03 OrthoFinder
AGT25179 N559_3531 excinuclease ABC subunit B [Ensembl]. UvrB interaction... 0.04 OrthoFinder
AKP14216 uvrB, WX61_00127 UvrABC system protein B [Ensembl]. UvrB/uvrC motif, UvrB... 0.03 OrthoFinder
CCL19860 uvrB, BN171_3570009 Excinuclease ABC subunit B [Ensembl]. Type III... 0.02 OrthoFinder
CPC48686 uvrB_1, ERS093114_00595 excinuclease ABC subunit B [Ensembl]. UvrB/uvrC motif,... 0.04 OrthoFinder
CRO42555 uvrB Excinuclease ABC subunit B [Ensembl]. UvrB/uvrC motif,... 0.03 OrthoFinder
KNA54611 VCV51_033208 excinuclease ABC [Ensembl]. UvrB/uvrC motif, UvrB... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR006935 Helicase/UvrB_N 13 92
IPR001943 UVR_dom 634 667
IPR024759 UvrB_YAD/RRR_dom 552 593
IPR001650 Helicase_C 436 544
IPR041471 UvrB_inter 159 249
No external refs found!