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  5. AAL19995

AAL19995 (STM1062, uup)


Aliases : STM1062, uup

Description : putative ATPase component of ABC transporter [Ensembl]. ABC transporter C-terminal domain [Interproscan].


Gene families : OG_02_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19995
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAC73907 ybiT, b0820 ABC-F family putative regulatory ATPase [Ensembl]. ABC... 0.14 OrthoFinder
AAC74035 uup, b0949 replication regulatory ABC-F family DNA-binding ATPase... 0.15 OrthoFinder
AAC76377 yheS, b3352 ABC-F family protein predicted regulatory ATPase... 0.05 OrthoFinder
AAC77344 ettA, b4391 energy-dependent translational throttle A [Ensembl]. ABC... 0.06 OrthoFinder
AAK99482 spr0678, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AAK99825 spr1021, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AAL00216 spr1412, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AEA93888 msrA, OG1RF_11201 ABC superfamily ATP binding cassette transporter, ABC... 0.01 OrthoFinder
AEA94367 OG1RF_11680 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AEA94698 OG1RF_12011 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT22228 N559_0416 putative ABC transporter ATP-binding protein [Ensembl].... 0.08 OrthoFinder
AGT24961 N559_3303 ABC transporter ATPase component [Ensembl]. ABC... 0.09 OrthoFinder
AGT26049 N559_4444 putative ABC transporter ATP-binding protein [Ensembl].... 0.04 OrthoFinder
AHY40102 CJ8421_04395 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AKI49428 L2625_01529 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder
AKI49870 uup, L2625_02017 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AKI50068 L2625_02223 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AKI50697 L2625_02912 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
AKP14644 yjjK, WX61_00565 putative ABC transporter ATP-binding protein YjjK... 0.04 OrthoFinder
AKP16088 uup_1, WX61_02062 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.02 OrthoFinder
AKP16180 uup_2, WX61_02156 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.08 OrthoFinder
CCG26162 No alias COG0488: ATPase components of ABC transporters with... 0.04 OrthoFinder
CCG26385 No alias ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
CCL16955 BN171_1030005 ABC-type transport system, ATP-binding protein... 0.03 OrthoFinder
CCL18408 BN171_2290013 ABC-type transport system, ATP-binding protein... 0.03 OrthoFinder
CPC31994 yheS_1, ERS093114_00026 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder
CPC50068 yjjK, ERS093114_00633 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.02 OrthoFinder
CRN86127 yheS_1 putative ABC transporter ATP-binding protein YheS... 0.05 OrthoFinder
CRO90899 uup ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.08 OrthoFinder
CRP46393 yheS_2 putative ABC transporter ATP-binding protein YheS... 0.08 OrthoFinder
EDJ91009 CGSHi22421_02766 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder
KNA54963 VCV51_033148 ABC transporter [Ensembl]. ABC transporter [Interproscan]. 0.04 OrthoFinder
KNA57470 VCV51_030455 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 19 185
IPR003439 ABC_transporter-like_ATP-bd 336 469
IPR032781 ABC_tran_Xtn 224 296
IPR032524 ABC_tran_C 561 629
No external refs found!