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Aliases : STM1309
Description : putative nuclease subunit of the excinuclease complex [Ensembl].
Gene families : OG_02_0000678 (OrthoFinder) Phylogenetic Tree(s): OG0000678_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL20234 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| CBI66587 | uvrC, HPB8_1030 | excinuclease ABC subunit C [Ensembl]. UvrB/uvrC motif,... | 0.02 | OrthoFinder | |
| CRO98609 | uvrC | Excinuclease ABC subunit C [Ensembl]. UvrB/uvrC motif,... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0004568 | chitinase activity | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006030 | chitin metabolic process | IEP | Enrichment |
| BP | GO:0006032 | chitin catabolic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006282 | regulation of DNA repair | IEP | Enrichment |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Enrichment |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008309 | double-stranded DNA exodeoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0008409 | 5'-3' exonuclease activity | IEP | Enrichment |
| MF | GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity | IEP | Enrichment |
| BP | GO:0009245 | lipid A biosynthetic process | IEP | Enrichment |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Enrichment |
| MF | GO:0009378 | four-way junction helicase activity | IEP | Enrichment |
| BP | GO:0009432 | SOS response | IEP | Enrichment |
| BP | GO:0009991 | response to extracellular stimulus | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
| BP | GO:0019076 | viral release from host cell | IEP | Enrichment |
| MF | GO:0019213 | deacetylase activity | IEP | Enrichment |
| BP | GO:0019835 | cytolysis | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| BP | GO:0031668 | cellular response to extracellular stimulus | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0035312 | 5'-3' exodeoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| BP | GO:0035890 | exit from host | IEP | Enrichment |
| BP | GO:0035891 | exit from host cell | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044403 | biological process involved in symbiotic interaction | IEP | Enrichment |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Enrichment |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0046493 | lipid A metabolic process | IEP | Enrichment |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Enrichment |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Enrichment |
| BP | GO:0051302 | regulation of cell division | IEP | Enrichment |
| BP | GO:0051701 | biological process involved in interaction with host | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0051782 | negative regulation of cell division | IEP | Enrichment |
| MF | GO:0051908 | double-stranded DNA 5'-3' exodeoxyribonuclease activity | IEP | Enrichment |
| BP | GO:0052126 | movement in host environment | IEP | Enrichment |
| BP | GO:0071496 | cellular response to external stimulus | IEP | Enrichment |
| BP | GO:0080134 | regulation of response to stress | IEP | Enrichment |
| BP | GO:0080135 | regulation of cellular response to stress | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Enrichment |
| BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:2001020 | regulation of response to DNA damage stimulus | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |