AAL20840 (STM1924, flhC)

Aliases : STM1924, flhC

Description : regulator of flagellar biosynthesis [Ensembl]. Flagellar transcriptional activator (FlhC) [Interproscan].

Gene families : OG_02_0004602 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL20840
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method	Actions
AAC74961	flhC, b1891	flagellar class II regulon transcriptional activator,...	0.09	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031344	regulation of cell projection organization	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060491	regulation of cell projection assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902115	regulation of organelle assembly	None	Extended
BP	GO:1902208	regulation of bacterial-type flagellum assembly	IEA	Interproscan
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0006935	chemotaxis	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0009306	protein secretion	IEP	Enrichment
BP	GO:0009405	obsolete pathogenesis	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
BP	GO:0030030	cell projection organization	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Enrichment
BP	GO:0042330	taxis	IEP	Enrichment
BP	GO:0044780	bacterial-type flagellum assembly	IEP	Enrichment
BP	GO:0044781	bacterial-type flagellum organization	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0046034	ATP metabolic process	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment
BP	GO:0071692	protein localization to extracellular region	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment
BP	GO:1902600	proton transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007944	FlhC	3	174

External Links

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AAL20840 (STM1924, flhC)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation