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  5. AAL20927

AAL20927 (STM2023, cbiM)


Aliases : STM2023, cbiM

Description : synthesis of vitamin B12 adenosyl cobalamide precursor [Ensembl]. Cobalt uptake substrate-specific transmembrane region [Interproscan].


Gene families : OG_02_0002122 (OrthoFinder) Phylogenetic Tree(s): OG0002122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20927
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AGT22832 N559_1053, CbiM cobalt transport protein CbiM [Ensembl]. 0.23 OrthoFinder
AKI49132 cbiM, L2625_01221 cobalamin biosynthesis protein [Ensembl]. Metal... 0.4 OrthoFinder
CCL18870 cbiM, BN171_270001 Cobalamin biosynthesis protein [Ensembl]. Cobalt uptake... 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005275 amine transmembrane transporter activity IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006824 cobalt ion transport IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008818 cobalamin 5'-phosphate synthase activity IEP Enrichment
MF GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
MF GO:0015087 cobalt ion transmembrane transporter activity IEP Enrichment
MF GO:0015101 organic cation transmembrane transporter activity IEP Enrichment
MF GO:0015665 alcohol transmembrane transporter activity IEP Enrichment
BP GO:0015695 organic cation transport IEP Enrichment
BP GO:0015837 amine transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Enrichment
MF GO:0016867 intramolecular transferase activity, transferring acyl groups IEP Enrichment
MF GO:0016993 precorrin-8X methylmutase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019251 anaerobic cobalamin biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0034228 ethanolamine transmembrane transporter activity IEP Enrichment
BP GO:0034229 ethanolamine transport IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
MF GO:0043752 adenosylcobinamide kinase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0048472 threonine-phosphate decarboxylase activity IEP Enrichment
MF GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002751 CbiM/NikMN 32 237
No external refs found!