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AAL22795 (STM3951, uvrD)


Aliases : STM3951, uvrD

Description : DNA-dependent ATPase I and helicase II [Ensembl]. UvrD/REP helicase N-terminal domain, UvrD-like helicase C-terminal domain [Interproscan].


Gene families : OG_02_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22795
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC76816 uvrD, b3813 DNA-dependent ATPase I and helicase II [Ensembl].... 0.1 OrthoFinder
AAK99799 spr0995, pcrA ATP-dependent DNA helicase [Ensembl]. UvrD/REP helicase... 0.02 OrthoFinder
AAK99844 spr1040, rexA First subunit of major exonuclease [Ensembl]. PD-(D/E)XK... 0.02 OrthoFinder
AEA93145 pcrA, OG1RF_10458 ATP-dependent DNA helicase PcrA [Ensembl]. UvrD/REP... 0.02 OrthoFinder
AKP15210 uvrD, WX61_01161 DNA helicase II [Ensembl]. UvrD/REP helicase N-terminal... 0.04 OrthoFinder
CBI65609 uvrD, HPB8_52 DNA helicase II / ATP-dependent DNA helicase PcrA... 0.03 OrthoFinder
CCL17180 BN171_1360002 Putative helicase, superfamily 1, UvrD-family [Ensembl].... 0.04 OrthoFinder
CRO28795 rep ATP-dependent DNA helicase rep [Ensembl]. UvrD/REP... 0.04 OrthoFinder
CRP05563 uvrD_2 DNA helicase II [Ensembl]. UvrD/REP helicase N-terminal... 0.02 OrthoFinder
KNA48025 VCV51_033860 ATP-dependent DNA helicase Rep [Ensembl]. UvrD/REP... 0.03 OrthoFinder
KNA52465 VCV51_030129 DNA helicase II [Ensembl]. UvrD/REP helicase N-terminal... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR014017 DNA_helicase_UvrD-like_C 277 616
No external refs found!