CCL19117 (murF, BN171_2870047)

Aliases : murF, BN171_2870047

Description : UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme) [Ensembl]. Mur ligase family, Mur ligase middle domain [Interproscan].

Gene families : OG_02_0000378 (OrthoFinder) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCL19117
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AAC73197	murF, b0086	UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine...	0.05	OrthoFinder
AAL19088	STM0124, murF	D-alanine:D-alanine-adding enzyme [Ensembl]. Mur ligase...	0.03	OrthoFinder
AEA93262	ppx, OG1RF_10575	exopolyphosphatase [Ensembl]. Mur ligase family, Mur...	0.03	OrthoFinder
AHY40010	CJ8421_03905	Mur ligase family protein [Ensembl]. Mur ligase middle...	0.03	OrthoFinder
AKI48804	murF, L2625_00877	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine...	0.04	OrthoFinder
AKP14610	murF, WX61_00529	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine...	0.03	OrthoFinder
CBI66504	murF, HPB8_947	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,...	0.03	OrthoFinder
CCG27254	No alias	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate...	0.04	OrthoFinder
CCP44933	murF, Rv2157c	Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2,...	0.02	OrthoFinder
CRP08587	murF	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine...	0.03	OrthoFinder
EDJ91938	murE, CGSHi22421_09283	UDP-N-acetylmuramoylalanyl-D-glutamate--2,...	0.02	OrthoFinder
KNA53283	VCV51_031618	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	Interproscan
MF	GO:0016874	ligase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001514	selenocysteine incorporation	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
CC	GO:0005887	integral component of plasma membrane	IEP	Enrichment
BP	GO:0005976	polysaccharide metabolic process	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0006417	regulation of translation	IEP	Enrichment
BP	GO:0006451	translational readthrough	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0008360	regulation of cell shape	IEP	Enrichment
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Enrichment
MF	GO:0008961	phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity	IEP	Enrichment
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	Enrichment
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Enrichment
MF	GO:0016744	transketolase or transaldolase activity	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Enrichment
BP	GO:0022604	regulation of cell morphogenesis	IEP	Enrichment
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Enrichment
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
BP	GO:0050793	regulation of developmental process	IEP	Enrichment
BP	GO:0051246	regulation of protein metabolic process	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004101	Mur_ligase_C	320	397
IPR000713	Mur_ligase_N	29	101
IPR013221	Mur_ligase_cen	112	298

External Links

UniProtKB	U3WYP7

CCL19117 (murF, BN171_2870047)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation