CPC48808 (prfB, ERS093114_00599)


Aliases : prfB, ERS093114_00599

Description : peptide chain release factor 2 [Ensembl]. PCRF domain, RF-1 domain [Interproscan].


Gene families : OG_02_0000648 (OrthoFinder) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC48808
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AAC75929 prfB, b2891 peptide chain release factor RF-2 [Ensembl]. RF-1... 0.02 OrthoFinder
AAK99469 spr0665, prfB Peptide chain release factor 2 [Ensembl]. RF-1 domain,... 0.03 OrthoFinder
AGT22704 N559_0916 peptide chain release factor 2 [Ensembl]. RF-1 domain,... 0.03 OrthoFinder
CCP45915 prfB, Rv3105c Probable peptide chain release factor 2 PrfB (RF-2)... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEA Interproscan
BP GO:0006415 translational termination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005139 PCRF 1 179
IPR000352 Pep_chain_release_fac_I 189 299
No external refs found!