CPD28059 (tyrS, ERS093114_02460)

Aliases : tyrS, ERS093114_02460

Description : Tyrosyl-tRNA synthetase [Ensembl]. S4 domain, tRNA synthetases class I (W and Y) [Interproscan].

Gene families : OG_02_0000263 (OrthoFinder) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CPD28059
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC74709 tyrS, b1637 tyrosyl-tRNA synthetase [Ensembl]. S4 domain, tRNA... 0.09 OrthoFinder
AAL20371 STM1449, tyrS tyrosine tRNA synthetase [Ensembl]. S4 domain, tRNA... 0.07 OrthoFinder
AEA94136 tyrS2, OG1RF_11449 tyrosine--tRNA ligase [Ensembl]. S4 domain, tRNA... 0.04 OrthoFinder
AHY40474 CJ8421_06335 tyrosyl-tRNA ligase [Ensembl]. tRNA synthetases class I... 0.03 OrthoFinder
AKI49596 tyrS, L2625_01705 tyrosyl-tRNA synthetase [Ensembl]. RNA-binding S4... 0.06 OrthoFinder
CRO81407 tyrS_1 Tyrosine--tRNA ligase [Ensembl]. tRNA synthetases class... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 30 324
IPR002942 S4_RNA-bd 361 400
No external refs found!