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  5. CCG26421

CCG26421 (CsrS)


Aliases : CsrS

Description : Transmembrane histidine kinase CsrS [Ensembl]. HAMP domain, Histidine kinase-, ArlS sensor domain, His Kinase A (phospho-acceptor) domain [Interproscan].


Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26421
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAK99909 spr1106, hk02 Histidine kinase [Ensembl]. PAS fold, Histidine kinase-,... 0.05 OrthoFinder
AAL21669 STM2784, tctE tricarboxylic transport regulatory protein [Ensembl].... 0.02 OrthoFinder
AEA93471 csrS, OG1RF_10784 sensor histidine kinase CsrS [Ensembl]. HAMP domain,... 0.04 OrthoFinder
AGT22346 N559_0548, ArcB aerobic respiration control sensor protein ArcB... 0.04 OrthoFinder
AHY40007 CJ8421_03890 signal transduction histidine kinase [Ensembl].... 0.03 OrthoFinder
AHY40430 CJ8421_06115 two-component sensor (histidine kinase) [Ensembl].... 0.03 OrthoFinder
AKI49375 lisK, L2625_01475 two-component sensor histidine kinase [Ensembl]. ArlS,... 0.04 OrthoFinder
AKI49505 L2625_01608 sensor histidine kinase [Ensembl]. Signal transduction... 0.04 OrthoFinder
CBI66876 atoS, HPB8_1319 two-component system, NtrC family, sensor histidine... 0.04 OrthoFinder
CBI66958 ompR5, HPB8_1401 two-component system, OmpR family, sensor kinase [Ensembl]. 0.02 OrthoFinder
CCP46064 mtrB, Rv3245c Two component sensory transduction histidine kinase MtrB... 0.02 OrthoFinder
CRP63180 rstB_2 Sensor protein RstB [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
KNA61031 VCV51_032006 hsp90-like protein [Ensembl]. Histidine kinase-, His... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008239 dipeptidyl-peptidase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR041610 ArlS_N 45 185
IPR003661 HisK_dim/P 270 333
IPR003660 HAMP_dom 212 264
IPR003594 HATPase_C 383 494
No external refs found!